Changelog

Version 2.9.0

  • use NeuroM dependency of version >= 3.0

  • use pytest instead of nosetests

Version 2.8.0

  • Use numpy.isclose in spatial point_to_section_segment. Add new keyword arguments rtol,``atol`` to point_to_section_segment. (#84)

  • Add functionality to plot morphologies with synapses. Move all plot functionality under plot package. (#82)

Version 2.7.0

  • Fix compatibility with numpy>=1.21 (#80)

  • Add missing entries of CHANGELOG (#79)

  • Revert “Introduce a function to get section ids of sections with cut leaves” (#78)

Version 2.6.0

  • Add sanitize to folder convert (#75)

  • move MorphToolException back into package init.py so as not to break api (#75)

  • Introduce a function to get section ids of sections with cut leaves (#76)

Version 2.5.1

  • Update to use NeuroM v2 (#62)

  • Fix apical_point_section_segment and point_to_section_segment with NeuroM v2 (#72)

  • Fix compatibility with NeuroM>=2.1 (#65)

  • Introduce ‘sanitize’ flag for conversion (#66)

  • Introduce axon point module (#54)

  • Allow to pass numpy rangom generators to graft_axon (#69)

  • Reduce the dependencies by putting ‘bluepyopt’ dependency behind ‘nrn’ extras (#63)

Version 2.4.7

Use this version if you want to work with NeuroM v1 and MorphIO v2

  • Fix upper constrains of MorphIO and NeuroM to keep old release stable

Version 2.4.1

  • Fix NestedPool for py38 and CI (#60)

Version 2.4.0

  • Make MorphDB.df hashable (#53)

  • Improve feature (#55)

  • Fix resampling issue from numerical imprecision (#58)

  • automatic morphology alignement (#51)

  • Introduce installation extras to lighten the package as dependency by default (#57)