Changelog¶
Version 2.9.0¶
use NeuroM dependency of version >= 3.0
use pytest instead of nosetests
Version 2.8.0¶
Use numpy.isclose in spatial
point_to_section_segment
. Add new keyword argumentsrtol
,``atol`` topoint_to_section_segment
. (#84)Add functionality to plot morphologies with synapses. Move all plot functionality under
plot
package. (#82)
Version 2.7.0¶
Fix compatibility with numpy>=1.21 (#80)
Add missing entries of CHANGELOG (#79)
Revert “Introduce a function to get section ids of sections with cut leaves” (#78)
Version 2.6.0¶
Add sanitize to folder convert (#75)
move MorphToolException back into package init.py so as not to break api (#75)
Introduce a function to get section ids of sections with cut leaves (#76)
Version 2.5.1¶
Update to use NeuroM v2 (#62)
Fix apical_point_section_segment and point_to_section_segment with NeuroM v2 (#72)
Fix compatibility with NeuroM>=2.1 (#65)
Introduce ‘sanitize’ flag for conversion (#66)
Introduce axon point module (#54)
Allow to pass numpy rangom generators to graft_axon (#69)
Reduce the dependencies by putting ‘bluepyopt’ dependency behind ‘nrn’ extras (#63)
Version 2.4.7¶
Use this version if you want to work with NeuroM v1 and MorphIO v2
Fix upper constrains of MorphIO and NeuroM to keep old release stable
Version 2.4.1¶
Fix NestedPool for py38 and CI (#60)
Version 2.4.0¶
Make MorphDB.df hashable (#53)
Improve feature (#55)
Fix resampling issue from numerical imprecision (#58)
automatic morphology alignment (#51)
Introduce installation extras to lighten the package as dependency by default (#57)